Install: ---------- SIMPLEST ------------ download the installer from http://ormbunkar.se/downloads/linux and run: aliview.install.run (this is a executable archive that will copy files to /usr/bin/ and /usr/share/aliview/, and will also install a .desktop link to the start-menu on compatible systems) - after downloading you will likely need to change the execution rights of the install file: chmod +x aliview.install.run - install by issuing command: sudo ./aliview.install.run (most likely you need to sudo the installation, if you don't have super user rights to the system see below) - start the program with command: aliview (this is a sh-script that will execute java -jar aliview.jar) -----*** ALTERNATIVE (as non super-user) ***----- 1. Download the archive aliview.tgz from http://ormbunkar.se/aliview/downloads/linux/ and extract it into a folder of your choice 2. Run program from this folder by issuing command ./aliview from the terminal (this is a sh-script that will execute command java -jar aliview.jar) NOTE: If you are running Linux, consider upgrading to Java 8 or Java 9, there is a significant improvement in drawing speed since it is using Linux built in XRender. Installation is very simple (1 minute) - http://ormbunkar.se/aliview/#java8install -----INSTALL FROM SOURCE ----- Procedure below requires root (`sudo`) access. Tested on 64 bit Xubuntu 17.10 with Oracle java version 1.8.0_72, and Apache Maven v.3.5.0. 1. Install Oracle Java 8 sudo add-apt-repository ppa:webupd8team/java sudo apt update sudo apt install oracle-java8-installer 2. Install Apache Maven sudo apt install maven 3. Install makeself sudo apt install makeself 4. Build, package, create installer and install AliView git clone https://github.com/AliView/AliView.git cd AliView mvn clean compile install package | tee mvn.build.log ./make_installer_linux.sh cd target/linux-version-* sudo ./aliview.install.run