#Unpack archive and run install.sh #install.sh will copy files to: /usr/bin /usr/share #run program with command: aliview [alignment-file] #aliview is a shell script that runs the aliview.jar with command: java -Xmx1024M -Xms512M -jar $DIRECTORY_OF_PROGRAM/aliview.jar $@ #the self extracting installer were created with following command: makeself aliview-linux/ aliview.install.run "Installer for AliView" ./install.sh